skip to main content


Search for: All records

Creators/Authors contains: "Casey, John R."

Note: When clicking on a Digital Object Identifier (DOI) number, you will be taken to an external site maintained by the publisher. Some full text articles may not yet be available without a charge during the embargo (administrative interval).
What is a DOI Number?

Some links on this page may take you to non-federal websites. Their policies may differ from this site.

  1. ABSTRACT The marine unicellular cyanobacterium Prochlorococcus is an abundant primary producer and widespread inhabitant of the photic layer in tropical and subtropical marine ecosystems, where the inorganic nutrients required for growth are limiting. In this study, we demonstrate that Prochlorococcus high-light strain MIT9301, an isolate from the phosphate-depleted subtropical North Atlantic Ocean, can oxidize methylphosphonate (MPn) and hydroxymethylphosphonate (HMPn), two phosphonate compounds present in marine dissolved organic matter, to obtain phosphorus. The oxidation of these phosphonates releases the methyl group as formate, which is both excreted and assimilated into purines in RNA and DNA. Genes encoding the predicted phosphonate oxidative pathway of MIT9301 were predominantly present in Prochlorococcus genomes from parts of the North Atlantic Ocean where phosphate availability is typically low, suggesting that phosphonate oxidation is an ecosystem-specific adaptation of some Prochlorococcus populations to cope with phosphate scarcity. IMPORTANCE Until recently, MPn was only known to be degraded in the environment by the bacterial carbon-phosphorus (CP) lyase pathway, a reaction that releases the greenhouse gas methane. The identification of a formate-yielding MPn oxidative pathway in the marine planctomycete Gimesia maris (S. R. Gama, M. Vogt, T. Kalina, K. Hupp, et al., ACS Chem Biol 14:735–741, 2019, https://doi.org/10.1021/acschembio.9b00024 ) and the presence of this pathway in Prochlorococcus indicate that this compound can follow an alternative fate in the environment while providing a valuable source of P to organisms. In the ocean, where MPn is a major component of dissolved organic matter, the oxidation of MPn to formate by Prochlorococcus may direct the flow of this one-carbon compound to carbon dioxide or assimilation into biomass, thus limiting the production of methane. 
    more » « less
  2. Abstract

    Cell size is broadly applied as a convenient parameterization of ecosystem models and is widely applicable to constrain the activities of organisms spanning large size ranges. However, the size structure of the majority of the marine picoplankton assemblage is narrow and beneath the lower size limit of the empirical allometric relationships established so far (typically >1 μm). We applied a fine‐resolution (0.05 μm increments) size fractionation method to estimate the size dependence of metabolic activities of picoplankton populations in the 0.10–1.00 μm size interval within the surface North Pacific Subtropical Gyre microbial assemblage. Group‐specific carbon retained on each filter was quantified by flow cytometric conversion of light scatter to cellular carbon quotas. Median carbon quotas were 25.7, 22.6, and 5.9 fg C cell−1for populations of the picocyanobacteriumProchlorococcus, high‐scatter heterotrophs, and low‐scatter heterotrophs, respectively. Carbon‐specific rates of primary production as a function of cell size, using the14C method, and phosphate transport, using33P radiotracers, resulted in negative power scalings (b) within populations ofProchlorococcusand heterotrophs ofb = −1.3 andb = −1.1, respectively. These findings are in contrast to the positive empirical power scaling comprising the broader and larger prokaryote category (b = 0.7) and point to within‐population variability in cell physiology and metabolism for these important microbial groups.

     
    more » « less
  3. From June to August 2018, the eruption of Kīlauea volcano on the island of Hawai‘i injected millions of cubic meters of molten lava into the nutrient-poor waters of the North Pacific Subtropical Gyre. The lava-impacted seawater was characterized by high concentrations of metals and nutrients that stimulated phytoplankton growth, resulting in an extensive plume of chlorophyll a that was detectable by satellite. Chemical and molecular evidence revealed that this biological response hinged on unexpectedly high concentrations of nitrate, despite the negligible quantities of nitrogen in basaltic lava. We hypothesize that the high nitrate was caused by buoyant plumes of nutrient-rich deep waters created by the substantial input of lava into the ocean. This large-scale ocean fertilization was therefore a unique perturbation event that revealed how marine ecosystems respond to exogenous inputs of nutrients. 
    more » « less